Roseovarius sp. A46

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. A46 is a Gram-negative bacterium characterized by possessing a single replicon. This classification places it within the broader context of the Roseovarius genus, which is known for its diverse metabolic capabilities and ecological roles. The genome of Roseovarius sp. A46 is cataloged under the accession number PVWS00000000.1, which can be referenced for further genomic studies or comparative analyses within the Roseovarius genus. As a member of the Roseobacter clade, Roseovarius sp. A46 may exhibit ecological significance in marine environments, where members of this group are often abundant. They are known to play critical roles in biogeochemical cycles, including carbon and sulfur cycles, due to their capacity for various metabolic processes. Their Gram-negative nature suggests the presence of an outer membrane, which may contribute to their survival in competitive microbial communities. In summary, Roseovarius sp. A46, with its single replicon and Gram-negative classification, is positioned within a group of bacteria that potentially play vital roles in marine ecosystems. Understanding its genomic features may provide insights into its ecological functions and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. A46
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. A46 scaffold118_size219, whole genome shotgun

Gene Summary

Adenine Count

608515 bp

Thymine Count

610992 bp

Guanine Count

1161672 bp

Cytosine Count

1152014 bp

Genome Length

3534212 bp

Protein-coding Genes

3363 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
benzoate--coa ligaseC6W92_14835Not AvailableNegative2989675 - 299120753876.8
glycosyl transferaseC6W92_14840Not AvailablePositive2991481 - 299215526041.4
kpsf/gutq family sugar-phosphate isomeraseC6W92_14845Not AvailablePositive2992271 - 299324533587.0
penicillin-binding proteinC6W92_14850Not AvailableNegative2993503 - 299601092137.8
n-acetylmuramoyl-l-alanine amidaseC6W92_14855Not AvailableNegative2996108 - 299734043448.6
rip metalloprotease rsepC6W92_14860Not AvailableNegative2997458 - 299880447277.4
1-deoxy-d-xylulose-5-phosphate reductoisomeraseC6W92_14865Not AvailableNegative2998808 - 299999841530.9
phosphatidate cytidylyltransferaseC6W92_14870Not AvailableNegative3000005 - 300077525570.8
di-trans,poly-cis-decaprenylcistransferaseC6W92_14875Not AvailableNegative3000772 - 300150327927.4
ribosome recycling factorC6W92_14880Not AvailableNegative3001521 - 300208421066.2

Displaying genes 2921 – 2930 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.