Pseudomonas simiae strain 73148/1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas simiae strain 73148/1 is characterized by having a single replicon, which is an important trait for its genetic stability and replication efficiency. This bacterium has been identified to infect Arabidopsis, a model organism frequently used in plant biology and microbiology for studying plant-microbe interactions. The strain is cataloged under the accession number PVUL00000000.1, which allows for the specific identification and retrieval of genomic data associated with this strain. This data can be valuable for research into the genetic and functional attributes of Pseudomonas simiae, particularly in its interactions with host plants like Arabidopsis. In the context of ecological interactions, Pseudomonas simiae strain 73148/1's association with Arabidopsis suggests a potential role in plant health, possibly as a beneficial microbe. Understanding its interactions with plant hosts could provide insights into its mechanisms of colonization and the effects it may have on plant growth and disease resistance. Such insights are critical for developing sustainable agricultural practices and enhancing crop resilience through microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
Strainstrain 73148/1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae strain 73148/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain 73148/1 NODE_203_length_200_cov_1380.34,

Gene Summary

Adenine Count

1338862 bp

Thymine Count

1360072 bp

Guanine Count

2021756 bp

Cytosine Count

1983685 bp

Genome Length

6704375 bp

Protein-coding Genes

6010 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorC7A11_16740Not AvailableNegative3652936 - 365433052727.6
duf2569 domain-containing proteinC7A11_16745Not AvailableNegative3654337 - 365485519245.8
dienelactone hydrolaseC7A11_16750Not AvailableNegative3654883 - 365592036217.6
peptide-methionine (s)-s-oxide reductaseC7A11_16755Not AvailablePositive3656052 - 365655819013.1
fad-dependent oxidoreductaseC7A11_16760Not AvailableNegative3656632 - 365788246008.7
3-dehydroquinate dehydrataseC7A11_16765Not AvailableNegative3657903 - 365834915918.9
rida family proteinC7A11_16770Not AvailableNegative3658367 - 365878915700.8
lysr family transcriptional regulatorC7A11_16775Not AvailablePositive3658973 - 365994735509.9
amino acid abc transporter permease/atp-binding proteinC7A11_16780Not AvailablePositive3660151 - 366166856178.1
phytanoyl-coa dioxygenase family proteinC7A11_16785Not AvailablePositive3661695 - 366256731812.1

Displaying genes 3381 – 3390 of 6158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.