Pseudomonas simiae strain 73148/1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas simiae strain 73148/1 is characterized by having a single replicon, which is an important trait for its genetic stability and replication efficiency. This bacterium has been identified to infect Arabidopsis, a model organism frequently used in plant biology and microbiology for studying plant-microbe interactions. The strain is cataloged under the accession number PVUL00000000.1, which allows for the specific identification and retrieval of genomic data associated with this strain. This data can be valuable for research into the genetic and functional attributes of Pseudomonas simiae, particularly in its interactions with host plants like Arabidopsis. In the context of ecological interactions, Pseudomonas simiae strain 73148/1's association with Arabidopsis suggests a potential role in plant health, possibly as a beneficial microbe. Understanding its interactions with plant hosts could provide insights into its mechanisms of colonization and the effects it may have on plant growth and disease resistance. Such insights are critical for developing sustainable agricultural practices and enhancing crop resilience through microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
Strainstrain 73148/1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae strain 73148/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain 73148/1 NODE_203_length_200_cov_1380.34,

Gene Summary

Adenine Count

1338862 bp

Thymine Count

1360072 bp

Guanine Count

2021756 bp

Cytosine Count

1983685 bp

Genome Length

6704375 bp

Protein-coding Genes

6010 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC7A11_15020Not AvailableNegative3271312 - 32715488520.4
phosphorylcholine phosphataseC7A11_15025Not AvailableNegative3271559 - 327261739347.5
l-cystine transporterC7A11_15030Not AvailablePositive3272859 - 327425048377.7
diacylglycerol kinaseC7A11_15035Not AvailableNegative3274346 - 327485818815.5
duf2868 domain-containing proteinC7A11_15040Not AvailablePositive3274928 - 327629849890.2
duf3482 domain-containing proteinC7A11_15045Not AvailablePositive3276291 - 327765849840.9
hypothetical proteinC7A11_15050Not AvailableNegative3277664 - 327820320309.7
hd domain-containing proteinC7A11_15055Not AvailableNegative3278295 - 327884920425.3
tigr03364 family fad-dependent oxidoreductaseC7A11_15060Not AvailableNegative3278849 - 327998241000.1
putative 2-aminoethylphosphonate abc transporter substrate-binding proteinC7A11_15065Not AvailableNegative3280037 - 328105037241.3

Displaying genes 3041 – 3050 of 6158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.