Pseudomonas simiae strain 73148/1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas simiae strain 73148/1 is characterized by having a single replicon, which is an important trait for its genetic stability and replication efficiency. This bacterium has been identified to infect Arabidopsis, a model organism frequently used in plant biology and microbiology for studying plant-microbe interactions. The strain is cataloged under the accession number PVUL00000000.1, which allows for the specific identification and retrieval of genomic data associated with this strain. This data can be valuable for research into the genetic and functional attributes of Pseudomonas simiae, particularly in its interactions with host plants like Arabidopsis. In the context of ecological interactions, Pseudomonas simiae strain 73148/1's association with Arabidopsis suggests a potential role in plant health, possibly as a beneficial microbe. Understanding its interactions with plant hosts could provide insights into its mechanisms of colonization and the effects it may have on plant growth and disease resistance. Such insights are critical for developing sustainable agricultural practices and enhancing crop resilience through microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
Strainstrain 73148/1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae strain 73148/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain 73148/1 NODE_203_length_200_cov_1380.34,

Gene Summary

Adenine Count

1338862 bp

Thymine Count

1360072 bp

Guanine Count

2021756 bp

Cytosine Count

1983685 bp

Genome Length

6704375 bp

Protein-coding Genes

6010 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseC7A11_11620Not AvailablePositive2547366 - 254882652717.3
3,4-dihydroxyphenylacetate 2,3-dioxygenaseC7A11_11625Not AvailablePositive2548876 - 254973331480.8
5-carboxymethyl-2-hydroxymuconate isomeraseC7A11_11630Not AvailablePositive2549749 - 255016215407.4
mfs transporterC7A11_11635Not AvailablePositive2550226 - 255153047480.0
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseC7A11_11640Not AvailablePositive2551542 - 255234529177.0
4-hydroxy-2-oxoheptanedioate aldolaseC7A11_11645Not AvailablePositive2552362 - 255316228312.2
homoprotocatechuate degradation operon regulator hparC7A11_11650Not AvailableNegative2553254 - 255368216420.2
fad-binding oxidoreductaseC7A11_11655Not AvailablePositive2553890 - 255518847715.4
hypothetical proteinC7A11_11660Not AvailablePositive2555324 - 255568913322.7
molybdenum cofactor biosynthesis protein fC7A11_11665Not AvailablePositive2555703 - 255652430707.9

Displaying genes 2371 – 2380 of 6158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.