Pseudomonas simiae strain 73148/1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas simiae strain 73148/1 is characterized by having a single replicon, which is an important trait for its genetic stability and replication efficiency. This bacterium has been identified to infect Arabidopsis, a model organism frequently used in plant biology and microbiology for studying plant-microbe interactions. The strain is cataloged under the accession number PVUL00000000.1, which allows for the specific identification and retrieval of genomic data associated with this strain. This data can be valuable for research into the genetic and functional attributes of Pseudomonas simiae, particularly in its interactions with host plants like Arabidopsis. In the context of ecological interactions, Pseudomonas simiae strain 73148/1's association with Arabidopsis suggests a potential role in plant health, possibly as a beneficial microbe. Understanding its interactions with plant hosts could provide insights into its mechanisms of colonization and the effects it may have on plant growth and disease resistance. Such insights are critical for developing sustainable agricultural practices and enhancing crop resilience through microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
Strainstrain 73148/1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae strain 73148/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain 73148/1 NODE_203_length_200_cov_1380.34,

Gene Summary

Adenine Count

1338862 bp

Thymine Count

1360072 bp

Guanine Count

2021756 bp

Cytosine Count

1983685 bp

Genome Length

6704375 bp

Protein-coding Genes

6010 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain alpha-keto acid dehydrogenase subunit e2C7A11_11360Not AvailablePositive2489210 - 249046944709.2
dihydrolipoyl dehydrogenaseC7A11_11365Not AvailablePositive2490473 - 249185248598.0
branched-chain amino acid aminotransferaseC7A11_11370Not AvailablePositive2491977 - 249299636923.2
gnat family acetyltransferaseC7A11_11375Not AvailableNegative2493070 - 249396332128.0
amidinotransferaseC7A11_11380Not AvailablePositive2494159 - 249508534777.3
ornithine cyclodeaminaseC7A11_11385Not AvailablePositive2495102 - 249614838069.8
abc transporter substrate-binding proteinC7A11_11390Not AvailablePositive2496393 - 249716928432.0
amino acid abc transporter permeaseC7A11_11395Not AvailablePositive2497242 - 249794325862.2
histidine abc transporter permease hismC7A11_11400Not AvailablePositive2497940 - 249865326676.1
histidine/lysine/arginine/ornithine abc transporter atp-binding proteinC7A11_11405Not AvailablePositive2498729 - 249948728178.2

Displaying genes 2321 – 2330 of 6158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.