Pseudomonas simiae strain 73148/1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas simiae strain 73148/1 is characterized by having a single replicon, which is an important trait for its genetic stability and replication efficiency. This bacterium has been identified to infect Arabidopsis, a model organism frequently used in plant biology and microbiology for studying plant-microbe interactions. The strain is cataloged under the accession number PVUL00000000.1, which allows for the specific identification and retrieval of genomic data associated with this strain. This data can be valuable for research into the genetic and functional attributes of Pseudomonas simiae, particularly in its interactions with host plants like Arabidopsis. In the context of ecological interactions, Pseudomonas simiae strain 73148/1's association with Arabidopsis suggests a potential role in plant health, possibly as a beneficial microbe. Understanding its interactions with plant hosts could provide insights into its mechanisms of colonization and the effects it may have on plant growth and disease resistance. Such insights are critical for developing sustainable agricultural practices and enhancing crop resilience through microbiome management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas simiae
Strainstrain 73148/1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas simiae strain 73148/1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere; rhizosphere of wheat
Biotic relationshipNot Available
Host(s)Triticum aestivum, Arabidopsis, Brachypodium distachyon
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas simiae strain 73148/1 NODE_203_length_200_cov_1380.34,

Gene Summary

Adenine Count

1338862 bp

Thymine Count

1360072 bp

Guanine Count

2021756 bp

Cytosine Count

1983685 bp

Genome Length

6704375 bp

Protein-coding Genes

6010 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-cysteine desulfhydraseC7A11_05100Not AvailableNegative1095401 - 109639334973.0
serine acetyltransferaseC7A11_05105Not AvailablePositive1096559 - 109748533400.9
high-affinity choline transporter bettC7A11_05110Not AvailablePositive1097756 - 109975673424.4
outer membrane porin, oprd familyC7A11_05115Not AvailablePositive1099936 - 110126447862.2
l-glyceraldehyde 3-phosphate reductaseC7A11_05120Not AvailablePositive1101373 - 110241038065.1
taurine dioxygenaseC7A11_05125Not AvailableNegative1102538 - 110337431252.0
taurine abc transporter permease taucC7A11_05130Not AvailableNegative1103389 - 110422529592.3
taurine abc transporter atp-binding subunitC7A11_05135Not AvailableNegative1104222 - 110500128179.2
taurine abc transporter substrate-binding proteinC7A11_05140Not AvailableNegative1105018 - 110599534319.3
glutamate--cysteine ligaseC7A11_05145Not AvailableNegative1106237 - 110782059241.3

Displaying genes 1091 – 1100 of 6158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.