Laceyella sediminis strain RHA1

aerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Thermoactinomycetaceae

Genus

Laceyella

Description

Laceyella sediminis strain RHA1 is a Gram-positive, aerobic bacterium characterized by its thermophilic nature, with an optimal growth temperature of 45°C. This strain is non-motile and possesses the ability to form spores, which is a critical adaptation for survival in fluctuating environmental conditions. The organism has a single replicon, highlighting its genomic structure's simplicity compared to other bacteria that may possess multiple replicons. The spore-forming capability is particularly significant as it enables Laceyella sediminis strain RHA1 to endure extreme temperatures and potentially harsh environmental stressors, thus facilitating its survival in thermophilic habitats. The strain is cataloged under the accession number PVTZ00000000.1, providing a reference point for further research and study. The ecological role of Laceyella sediminis strain RHA1 may involve participating in the degradation of organic matter in high-temperature environments, contributing to nutrient cycling. Its thermophilic characteristics suggest that it could play a role in biogeochemical processes in hot springs or similar habitats, where it may interact with other microorganisms and influence the local ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyThermoactinomycetaceae
GenusLaceyella
SpeciesLaceyella sediminis
Strainstrain RHA1

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature45
Temperature rangethermophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Laceyella sediminis strain RHA1 Ga0180972_144, whole genome

Gene Summary

Adenine Count

862958 bp

Thymine Count

870488 bp

Guanine Count

769277 bp

Cytosine Count

889443 bp

Genome Length

3392166 bp

Protein-coding Genes

3361 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat repeat proteinCLV36_110108Not AvailableNegative2540135 - 254127743110.4
translation elongation factor p (ef-p)CLV36_110109Not AvailableNegative2541350 - 254190720855.8
xaa-pro aminopeptidaseCLV36_110110Not AvailableNegative2541911 - 254300240113.5
3-dehydroquinate dehydrataseCLV36_110111Not AvailableNegative2543005 - 254346316795.2
uncharacterized protein yqhqCLV36_110112Not AvailablePositive2543753 - 254472136029.1
hypothetical proteinCLV36_110113Not AvailablePositive2544746 - 254502710809.6
nte family proteinCLV36_110114Not AvailableNegative2545158 - 254611735840.2
dtxr family iron (metal) dependent repressorCLV36_110115Not AvailableNegative2546201 - 254663816910.2
hypothetical proteinCLV36_110116Not AvailableNegative2546595 - 25467084306.22
nad(p)h-dependent fmn reductaseCLV36_110117Not AvailableNegative2546718 - 254728420419.7

Displaying genes 2601 – 2610 of 3472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 26 metabolites

Health Effects

No health effects information available for this bacterium.