Donghicola tyrosinivorans strain DSM 100212

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Donghicola

Description

Donghicola tyrosinivorans strain DSM 100212 is a notable bacterial strain characterized by having a single replicon, which is a significant trait for understanding its genetic stability and replication processes. The strain is cataloged under the accession number PVTQ00000000.1, which provides a reference for researchers seeking to access its genomic data. As a member of the Donghicola genus, D. tyrosinivorans contributes to the exploration of microbial diversity and functionality in various environments. This strain's unique metabolic capabilities could be of interest in biotechnological applications, particularly in bioremediation processes, where the breakdown of complex compounds is crucial. The presence of a single replicon may suggest a streamlined genetic organization, potentially allowing for efficient replication and expression of genes relevant to its ecological roles. This characteristic can influence the strain's adaptability to environmental stressors and its ecological interactions. In summary, Donghicola tyrosinivorans strain DSM 100212, with its single replicon and documented genomic data, presents valuable opportunities for further research into its metabolic pathways and ecological significance. Understanding its genetic traits could provide insights into its role in nutrient cycling and microbial community dynamics in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusDonghicola
SpeciesDonghicola tyrosinivorans
Strainstrain DSM 100212

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Donghicola tyrosinivorans strain DSM 100212 Ga0181042_161, whole

Gene Summary

Adenine Count

935757 bp

Thymine Count

958512 bp

Guanine Count

1420453 bp

Cytosine Count

1372799 bp

Genome Length

4687719 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-oxalomesaconate tautomeraseCLV74_10680Not AvailableNegative2163071 - 216414437465.1
4-hydroxy-4-methyl-2-oxoglutarate aldolaseCLV74_10681Not AvailableNegative2164229 - 216490323631.4
catechol 2,3-dioxygenaseCLV74_10682Not AvailableNegative2164914 - 216586735956.8
cytochrome b561CLV74_10683Not AvailableNegative2165897 - 216638217809.4
4-oxalomesaconate hydrataseCLV74_10684Not AvailableNegative2166447 - 216717827493.6
dna-binding transcriptional lysr family regulatorCLV74_10685Not AvailablePositive2167333 - 216851743143.1
trap-type c4-dicarboxylate transport system substrate-binding proteinCLV74_10686Not AvailablePositive2168631 - 216960233848.0
trap-type c4-dicarboxylate transport system permease small subunitCLV74_10687Not AvailablePositive2169606 - 217011818393.8
tripartite atp-independent transporter dctm subunitCLV74_10688Not AvailablePositive2170111 - 217141545585.6
hypothetical proteinCLV74_10689Not AvailableNegative2171456 - 21716597347.53

Displaying genes 2141 – 2150 of 4533 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.