Bacillus pumilus strain LDZX38

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus pumilus strain LDZX38 is a terrestrial, Gram-positive bacterium characterized by its rod shape and aerobic nature. This strain is capable of mobility, facilitated by the presence of flagella. It falls within the mesophilic temperature range, indicating that it thrives in moderate temperature conditions. Bacillus pumilus LDZX38 is noted for its ability to sporulate, a trait that enables it to survive in challenging environmental conditions. It has a single replicon and one membrane, which is typical of many bacterial species. This strain is free-living, meaning that it does not rely on a host for survival, yet it is associated with various hosts, including Homo sapiens, Metazoa, Viridiplantae, Solanum tuberosum, and Glycyrrhiza uralensis. In terms of health implications, Bacillus pumilus can be involved in food poisoning incidents and may act as a plant pathogen. Its relationship with multiple hosts suggests that it may play a role in various ecological interactions, including those that influence plant health and potentially impact agricultural practices. Overall, the adaptability of Bacillus pumilus strain LDZX38, combined with its pathogenic potential, highlights its significance in both ecological contexts and food safety considerations. Understanding the traits and behaviors of this strain can inform strategies to mitigate its negative impacts while potentially harnessing its beneficial aspects in various environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus pumilus
Strainstrain LDZX38

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Bacillus pumilus strain LDZX38
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus pumilus strain LDZX38 NODE_22_length_724_cov_37.536,

Gene Summary

Adenine Count

1107283 bp

Thymine Count

1113729 bp

Guanine Count

779527 bp

Cytosine Count

797435 bp

Genome Length

3798185 bp

Protein-coding Genes

3657 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yaii/yqxd family proteinC6X97_03040Not AvailablePositive554825 - 55532519160.8
dna primaseC6X97_03045Not AvailablePositive555359 - 55718870228.0
rna polymerase sigma factor rpodC6X97_03050Not AvailablePositive557390 - 55851143225.2
cytochrome cC6X97_03055Not AvailablePositive558815 - 55917412890.6
trna (adenine(22)-n(1))-methyltransferase trmkC6X97_03060Not AvailablePositive559295 - 56001126942.7
nif3-like dinuclear metal center hexameric proteinC6X97_03065Not AvailablePositive560004 - 56112541255.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseC6X97_03070Not AvailableNegative561160 - 56210434680.4
spore coat proteinC6X97_03075Not AvailableNegative562263 - 56296124442.1
atp-dependent helicaseC6X97_03080Not AvailablePositive563117 - 56443649954.0
deoxyribonuclease ivC6X97_03085Not AvailablePositive564446 - 56533932770.3

Displaying genes 701 – 710 of 1386 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC6402940
Food poisoningCausesPMC9658697
Plant pathogensCausesPMC12287039

Displaying health effects 1 – 3 of 3 in total