Bacillus atrophaeus strain LSSC3

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus atrophaeus strain LSSC3 is a Gram-positive, rod-shaped bacterium that exhibits sporulation and thrives in aerobic conditions, primarily inhabiting soil environments. As a member of the Bacillus genus, this strain's ability to form spores is significant for its survival and resilience in various ecological niches, allowing it to endure unfavorable conditions and remain viable over extended periods. The aerobic nature of Bacillus atrophaeus strain LSSC3 suggests that it plays a crucial role in soil microbiomes where oxygen is available. This characteristic may facilitate its involvement in various biogeochemical processes, such as the decomposition of organic matter and nutrient cycling. Additionally, the presence of this strain in soil ecosystems could contribute to the overall microbial diversity and health of these environments, potentially influencing plant growth and soil quality. In summary, the unique combination of traits in Bacillus atrophaeus strain LSSC3 highlights its adaptive strategies that enable it to thrive in aerobic soil habitats, positioning it as a key player in soil ecology and microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus atrophaeus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Bacillus atrophaeus strain LSSC3
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus atrophaeus strain LSSC3

Accession NumberPVQO00000000.1

Gene Summary

Adenine Count

1192330 bp

Thymine Count

1145478 bp

Guanine Count

913699 bp

Cytosine Count

871616 bp

Genome Length

4123307 bp

Protein-coding Genes

3825 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+14862 - 14875Not Available
Site-specific recombinase for integration and excisionC6W24_00100Not Available-23321 - 2474855941.1
Hypothetical proteinC6W24_00105Not Available-24789 - 2523517309.8
Immunity repressorC6W24_00110Not Available-25249 - 2568316569.7
Helix-turn-helix transcriptional regulatorC6W24_00115Not Available+25942 - 2621410075.5
Hypothetical proteinC6W24_00120Not Available+26435 - 2671010524.7
Hypothetical proteinC6W24_00125Not Available+26912 - 2746920685.6
Hypothetical proteinC6W24_00130Not Available+27473 - 2841135005.0
Hypothetical proteinC6W24_00135Not Available+28401 - 285987342.64
Hypothetical proteinC6W24_00140Not Available+28618 - 2905516419.2

Displaying genes 1 – 10 of 3992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

308 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 308 metabolites