Burkholderia ambifaria strain AU20319

Gram-negativeRodNon-motileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia ambifaria strain AU20319 is a Gram-negative, non-motile, rod-shaped bacterium that exhibits facultative aerobe characteristics, allowing it to thrive in both aerobic and anaerobic environments. This strain is mesophilic, with an optimal growth temperature of 30°C, indicating its preference for moderate temperature ranges. The bacterium possesses a unique cellular structure, characterized by two membranes and a single replicon, which is typical of Gram-negative organisms. Importantly, Burkholderia ambifaria AU20319 does not undergo sporulation, suggesting that it relies on other survival strategies in fluctuating environmental conditions. As a free-living organism, Burkholderia ambifaria strain AU20319 is likely to inhabit various ecological niches, although specific habitats are not detailed. Its adaptability to diverse environments may confer ecological advantages, such as the ability to exploit different nutrient sources or thrive in varying oxygen levels. This bacterium's ability to exist in multiple habitats and its facultative aerobic nature may contribute to its role in soil health or bioremediation processes, where it could interact with other microorganisms and participate in nutrient cycling. Understanding such traits can provide insights into the ecological dynamics of microbial communities and the potential applications of Burkholderia ambifaria in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia ambifaria
Strainstrain AU20319

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Burkholderia ambifaria strain AU20319
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Lathyrus oleraceus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia ambifaria strain AU20319 AU20319_NODE_54.ctg_1, whole

Gene Summary

Adenine Count

1259033 bp

Thymine Count

1256061 bp

Guanine Count

2524631 bp

Cytosine Count

2506468 bp

Genome Length

7546193 bp

Protein-coding Genes

6660 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Dna adenine methylaseC6Q14_22605Not AvailableNegative4971205 - 497199330107.0
Duf2514 family proteinC6Q14_22610Not AvailableNegative4972162 - 497265617480.5
Putative endolysin proteinC6Q14_22615Not AvailableNegative4972653 - 497314717908.4
Holin gp22C6Q14_22620Not AvailableNegative4973150 - 49734349906.6
Late control d family proteinC6Q14_22625Not AvailableNegative4973508 - 497456037736.3
Tail protein xC6Q14_22630Not AvailableNegative4974571 - 49747777549.0
Putative tail proteinC6Q14_22635Not AvailableNegative4974752 - 497563330807.3
Tail length tape measure proteinC6Q14_22640Not AvailableNegative4975643 - 497805783541.5
Hypothetical proteinC6Q14_22645Not AvailableNegative4978113 - 497844212041.2
Putative tail proteinC6Q14_22650Not AvailableNegative4978519 - 497902218282.1

Displaying genes 11 – 20 of 6764 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

86 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 86 metabolites

Health Effects

No health effects information available for this bacterium.