Sphingobacterium haloxyli strain 5JN-11 ZB100074

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium haloxyli strain 5JN-11 (accession PVBQ00000000.1) is characterized by its rod-shaped morphology. The strain has a single replicon, which is indicative of its genetic structure. Sphingobacterium species are known for their versatility in various environments, particularly in relation to their ability to degrade complex organic materials. The rod shape of Sphingobacterium haloxyli strain 5JN-11 suggests a potential adaptability to its ecological niche, allowing for efficient movement and interaction with its surroundings. This morphological trait may facilitate its role in microbial communities, particularly in soil and water ecosystems where it can contribute to nutrient cycling and organic matter decomposition. The presence of a single replicon can also imply a streamlined genomic organization, which may enhance its adaptability and survival in fluctuating environmental conditions. This trait is often associated with bacteria that thrive in specific ecological niches, allowing them to optimize resource utilization. Overall, Sphingobacterium haloxyli strain 5JN-11 is likely to play a significant role in its ecosystem, particularly in the degradation of organic compounds. Its rod shape and single replicon structure may contribute to its ecological success, emphasizing the importance of morphological and genetic traits in the survival and function of microbial species in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium haloxyli
Strainstrain 5JN-11 ZB100074

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium haloxyli strain 5JN-11 ZB100074
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium haloxyli strain 5JN-11 ZB100074, whole genome

Gene Summary

Adenine Count

1334012 bp

Thymine Count

1350676 bp

Guanine Count

1028943 bp

Cytosine Count

980768 bp

Genome Length

4694399 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease subunit gammaC5745_07180Not AvailablePositive1789493 - 178979511480.3
urease subunit betaC5745_07185Not AvailablePositive1789814 - 179018513755.4
urease subunit alphaC5745_07190Not AvailablePositive1790201 - 179205766921.1
urease accessory protein urefC5745_07200Not AvailablePositive1792549 - 179323526283.8
urease accessory protein uregC5745_07205Not AvailablePositive1793244 - 179385522386.8
urease accessory protein uredC5745_07210Not AvailablePositive1793868 - 179490839217.1
hydrogenase expression proteinC5745_07215Not AvailablePositive1794922 - 179526913235.8
hydrogenase accessory protein hypbC5745_07220Not AvailablePositive1795269 - 179598225866.4
urease accessory protein ureeC5745_07225Not AvailablePositive1795995 - 179641115680.9
iron abc transporter substrate-binding proteinC5745_07230Not AvailablePositive1796435 - 179745438478.2

Displaying genes 1431 – 1440 of 3947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.