Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | C6B13_03655 | Not Available | Positive | 749634 - 751460 | 64097.2 |
| hydrogenase 3 membrane subunit | C6B13_03660 | Not Available | Positive | 751463 - 752386 | 33059.4 |
| formate hydrogenlyase subunit 5 | C6B13_03665 | Not Available | Positive | 752404 - 754113 | 64984.1 |
| 4fe-4s dicluster domain-containing protein | C6B13_03670 | Not Available | Positive | 754123 - 754665 | 20328.4 |
| formate hydrogenlyase | C6B13_03675 | Not Available | Positive | 754665 - 755432 | 27999.7 |
| formate hydrogenlyase maturation protein hych | C6B13_03680 | Not Available | Positive | 755429 - 755839 | 15477.6 |
| hydrogenase 3 maturation endopeptidase hyci | C6B13_03685 | Not Available | Positive | 755832 - 756302 | 17057.6 |
| hypothetical protein | C6B13_03690 | Not Available | Positive | 756327 - 756512 | 6968.54 |
| transcriptional regulator | C6B13_03695 | Not Available | Positive | 756538 - 756957 | 15398.2 |
| 6-phospho-beta-glucosidase | C6B13_03700 | Not Available | Negative | 757036 - 758460 | 53800.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





