Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxide-stimulated promoter family protein | C6B13_03605 | Not Available | Positive | 741603 - 741947 | 13535.7 |
| transporter | C6B13_03610 | Not Available | Negative | 741986 - 742453 | 15893.3 |
| formate hydrogenlyase transcriptional activator flha | C6B13_03615 | Not Available | Negative | 742459 - 744537 | 78400.5 |
| hydrogenase expression/formation protein hype | C6B13_03620 | Not Available | Negative | 744611 - 745621 | 35170.6 |
| hydrogenase formation protein hypd | C6B13_03625 | Not Available | Negative | 745618 - 746739 | 41366.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | C6B13_03630 | Not Available | Negative | 746739 - 747011 | 9792.62 |
| hydrogenase nickel incorporation protein hypb | C6B13_03635 | Not Available | Negative | 747002 - 747874 | 31596.9 |
| protein hypa | C6B13_03640 | Not Available | Negative | 747878 - 748228 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | C6B13_03645 | Not Available | Positive | 748440 - 748901 | 17642.0 |
| formate hydrogenlyase subunit 2 | C6B13_03650 | Not Available | Positive | 749026 - 749637 | 21874.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





