Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | C6B13_03550 | Not Available | Positive | 730264 - 731313 | 39122.7 |
| 5'/3'-nucleotidase sure | C6B13_03555 | Not Available | Positive | 731294 - 732055 | 26902.0 |
| protein-l-isoaspartate o-methyltransferase | C6B13_03560 | Not Available | Positive | 732049 - 732675 | 23259.2 |
| murein hydrolase activator nlpd | C6B13_03565 | Not Available | Positive | 732815 - 733954 | 40171.3 |
| rna polymerase sigma factor rpos | C6B13_03570 | Not Available | Positive | 734017 - 735009 | 37975.1 |
| transcriptional regulator | C6B13_03575 | Not Available | Negative | 735130 - 735537 | 15483.9 |
| phenolic acid decarboxylase | C6B13_03585 | Not Available | Positive | 736278 - 737705 | 52355.8 |
| hypothetical protein | C6B13_03590 | Not Available | Positive | 737716 - 737952 | 9180.05 |
| serine/threonine protein phosphatase | C6B13_03595 | Not Available | Negative | 737993 - 738649 | 24978.4 |
| dna mismatch repair protein muts | C6B13_03600 | Not Available | Negative | 738755 - 741316 | 95304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





