Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system needle complex protein | C6B13_02930 | Not Available | Positive | 597233 - 597472 | 9038.44 |
| hypothetical protein | C6B13_02935 | Not Available | Positive | 597492 - 597824 | 12241.6 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C6B13_02940 | Not Available | Positive | 597821 - 598555 | 27789.9 |
| type iii secretion apparatus protein orga/mxik | C6B13_02945 | Not Available | Positive | 598571 - 599152 | 22818.9 |
| hypothetical protein | C6B13_02955 | Not Available | Positive | 599370 - 599801 | 16796.8 |
| luxr family transcriptional regulator | C6B13_02960 | Not Available | Positive | 600024 - 600656 | 23427.7 |
| lytic transglycosylase | C6B13_02965 | Not Available | Negative | 600674 - 601177 | 19271.9 |
| hypothetical protein | C6B13_02970 | Not Available | Negative | 601261 - 601479 | 8154.38 |
| transcriptional regulator | C6B13_02975 | Not Available | Negative | 601647 - 603023 | 52783.9 |
| cesd/sycd/lcrh family type iii secretion system chaperone | C6B13_02980 | Not Available | Negative | 603358 - 603849 | 18925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





