Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | C6B13_02880 | Not Available | Positive | 589832 - 590299 | 18714.9 |
| type iii secretion protein | C6B13_02885 | Not Available | Positive | 590277 - 591152 | 33671.8 |
| yscq/hrcq family type iii secretion apparatus protein | C6B13_02890 | Not Available | Positive | 591152 - 592099 | 36096.2 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C6B13_02895 | Not Available | Positive | 592089 - 592754 | 24540.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C6B13_02900 | Not Available | Positive | 592764 - 593024 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C6B13_02905 | Not Available | Positive | 593026 - 593793 | 28103.7 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | C6B13_02910 | Not Available | Positive | 593802 - 594923 | 43357.4 |
| invasion protein | C6B13_02915 | Not Available | Negative | 594984 - 595277 | 11160.4 |
| luxr family transcriptional regulator | C6B13_02920 | Not Available | Negative | 595279 - 595779 | 19131.0 |
| prgh/eprh family type iii secretion apparatus protein | C6B13_02925 | Not Available | Positive | 596029 - 597219 | 45410.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





