Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium-dependent hydroxylase accessory protein yqec | C6B13_02775 | Not Available | Positive | 564548 - 565318 | 28254.3 |
| hypothetical protein | C6B13_02780 | Not Available | Positive | 565366 - 566991 | 57741.5 |
| carbamate kinase | C6B13_02785 | Not Available | Negative | 567032 - 567964 | 33087.0 |
| d-phenylhydantoinase | C6B13_02790 | Not Available | Negative | 568012 - 569397 | 51032.1 |
| ygey family selenium metabolism-linked hydrolase | C6B13_02795 | Not Available | Negative | 569450 - 570661 | 44806.4 |
| plp-dependent lyase/thiolase | C6B13_02800 | Not Available | Negative | 570719 - 571915 | 43330.1 |
| knotted carbamoyltransferase ygew | C6B13_02805 | Not Available | Negative | 571973 - 573163 | 44189.9 |
| sigma-54-dependent fis family transcriptional regulator | C6B13_02810 | Not Available | Positive | 573639 - 575417 | 66028.9 |
| xanthine dehydrogenase iron-sulfur-binding subunit | C6B13_02815 | Not Available | Negative | 575457 - 575936 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | C6B13_02820 | Not Available | Negative | 575933 - 576811 | 31632.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





