Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | C6B13_26380 | Not Available | Positive | 5119855 - 5121324 | 53413.7 |
| arginine decarboxylase | C6B13_26385 | Not Available | Positive | 5121429 - 5123798 | 88728.2 |
| amino acid permease | C6B13_26390 | Not Available | Positive | 5123930 - 5125372 | 51799.6 |
| is1 family transposase | C6B13_26395 | Not Available | Positive | 5125515 - 5125693 | 6643.95 |
| rusa family crossover junction endodeoxyribonuclease | C6B13_26400 | Not Available | Negative | 5125694 - 5125916 | 8753.84 |
| duf968 domain-containing protein | C6B13_26405 | Not Available | Negative | 5125929 - 5126978 | 39119.0 |
| hypothetical protein | C6B13_26410 | Not Available | Negative | 5126980 - 5127258 | 11321.4 |
| hypothetical protein | C6B13_26415 | Not Available | Negative | 5127325 - 5127576 | 9277.3 |
| hok/gef family protein | C6B13_26420 | Not Available | Negative | 5127793 - 5128005 | 7857.87 |
| hypothetical protein | C6B13_26425 | Not Available | Negative | 5128164 - 5128367 | 7229.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





