Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | C6B13_24115 | Not Available | Negative | 4754370 - 4755005 | 23068.7 |
| phosphomethylpyrimidine synthase thic | C6B13_24120 | Not Available | Negative | 4755005 - 4756900 | 70784.3 |
| sigma d regulator | C6B13_24125 | Not Available | Negative | 4757133 - 4757609 | 18243.9 |
| nad(+) diphosphatase | C6B13_24130 | Not Available | Positive | 4757704 - 4758477 | 29731.7 |
| uroporphyrinogen decarboxylase | C6B13_24135 | Not Available | Positive | 4758517 - 4759581 | 39104.3 |
| endonuclease v | C6B13_24140 | Not Available | Positive | 4759591 - 4760262 | 24673.9 |
| duf416 domain-containing protein | C6B13_24145 | Not Available | Positive | 4760305 - 4760895 | 22613.9 |
| dna-binding protein hu-alpha | C6B13_24150 | Not Available | Positive | 4761082 - 4761354 | 9535.51 |
| duf1481 domain-containing protein | C6B13_24155 | Not Available | Positive | 4761367 - 4762062 | 26352.9 |
| zinc resistance-associated protein | C6B13_24160 | Not Available | Negative | 4762064 - 4762489 | 15200.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





