Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | C6B13_23950 | Not Available | Negative | 4724215 - 4725390 | 44828.9 |
| redox-regulated atpase ychf | C6B13_23955 | Not Available | Negative | 4725604 - 4726695 | 39669.6 |
| peptidyl-trna hydrolase | C6B13_23960 | Not Available | Negative | 4726812 - 4727396 | 21083.5 |
| hypothetical protein | C6B13_23965 | Not Available | Positive | 4727674 - 4727952 | 10486.9 |
| c4-dicarboxylic acid transporter daua | C6B13_23970 | Not Available | Negative | 4728007 - 4729686 | 59414.8 |
| ribose-phosphate pyrophosphokinase | C6B13_23980 | Not Available | Negative | 4729811 - 4730758 | 34220.3 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | C6B13_23990 | Not Available | Negative | 4730909 - 4731760 | 30982.2 |
| outer membrane lipoprotein lolb | C6B13_23995 | Not Available | Negative | 4731760 - 4732383 | 23552.1 |
| glutamyl-trna reductase | C6B13_24000 | Not Available | Positive | 4732597 - 4733853 | 46402.6 |
| peptide chain release factor 1 | C6B13_24005 | Not Available | Positive | 4733895 - 4734977 | 40503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





