Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | C6B13_23780 | Not Available | Positive | 4690578 - 4691993 | 52416.2 |
| type vi secretion system membrane subunit tssm | C6B13_23785 | Not Available | Positive | 4692072 - 4695536 | 131979.0 |
| hypothetical protein | C6B13_23790 | Not Available | Positive | 4695547 - 4696899 | 50772.6 |
| type vi secretion system tube protein hcp | C6B13_23795 | Not Available | Positive | 4696923 - 4697405 | 17962.5 |
| hypothetical protein | C6B13_23800 | Not Available | Positive | 4697449 - 4698357 | 33831.1 |
| hypothetical protein | C6B13_23805 | Not Available | Positive | 4698372 - 4698839 | 17719.3 |
| hypothetical protein | C6B13_23810 | Not Available | Negative | 4698989 - 4699774 | 29555.2 |
| Trna-asp | Not Available | Not Available | Positive | 4700100 - 4700176 | Not Available |
| hypothetical protein | C6B13_23820 | Not Available | Positive | 4700190 - 4700420 | 8449.45 |
| dna polymerase iii subunit epsilon | C6B13_23825 | Not Available | Negative | 4700309 - 4701040 | 27130.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





