Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | C6B13_23730 | Not Available | Positive | 4678344 - 4679819 | 55693.0 |
| type vi secretion system baseplate subunit tsse | C6B13_23735 | Not Available | Positive | 4679826 - 4680239 | 15443.1 |
| type vi secretion system baseplate subunit tssf | C6B13_23740 | Not Available | Positive | 4680243 - 4682093 | 71074.8 |
| type vi secretion system baseplate subunit tssg | C6B13_23745 | Not Available | Positive | 4682057 - 4683139 | 40251.1 |
| type vi secretion system-associated fha domain protein tagh | C6B13_23750 | Not Available | Positive | 4683164 - 4684444 | 47366.8 |
| type vi secretion system lipoprotein tssj | C6B13_23755 | Not Available | Positive | 4684441 - 4684965 | 19395.0 |
| type vi secretion system baseplate subunit tssk | C6B13_23760 | Not Available | Positive | 4684968 - 4686299 | 49894.7 |
| hypothetical protein | C6B13_23765 | Not Available | Positive | 4686304 - 4687065 | 29432.8 |
| type vi secretion system atpase tssh | C6B13_23770 | Not Available | Positive | 4687074 - 4689833 | 100689.0 |
| type vi secretion system-associated protein tago | C6B13_23775 | Not Available | Positive | 4689830 - 4690573 | 26533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





