Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein ibpb | C6B13_23680 | Not Available | Negative | 4671270 - 4671698 | 16094.1 |
| heat-shock protein ibpa | C6B13_23685 | Not Available | Negative | 4671810 - 4672223 | 15774.6 |
| ycek/yidq family lipoprotein | C6B13_23690 | Not Available | Positive | 4672529 - 4672861 | 11826.3 |
| duf3748 domain-containing protein | C6B13_23695 | Not Available | Negative | 4672863 - 4674110 | 46170.1 |
| colicin m resistance protein cbra | C6B13_23700 | Not Available | Positive | 4674178 - 4675242 | 40082.5 |
| mfs transporter | C6B13_23705 | Not Available | Negative | 4675239 - 4676018 | 27849.9 |
| hypothetical protein | C6B13_23710 | Not Available | Negative | 4676149 - 4676286 | 5018.2 |
| type vi secretion system tube protein hcp | C6B13_23715 | Not Available | Negative | 4676319 - 4676837 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C6B13_23720 | Not Available | Positive | 4677534 - 4678034 | 18062.5 |
| hypothetical protein | C6B13_23725 | Not Available | Positive | 4678069 - 4678293 | 8396.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





