Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | C6B13_21965 | Not Available | Negative | 4347038 - 4347673 | 22952.1 |
| lytic transglycosylase | C6B13_21970 | Not Available | Negative | 4347692 - 4348165 | 17765.6 |
| prepilin-type cleavage/methylation domain-containing protein | C6B13_21975 | Not Available | Negative | 4348219 - 4348755 | 19396.4 |
| type ii secretion protein f | C6B13_21980 | Not Available | Negative | 4348829 - 4349929 | 40999.3 |
| type ii secretion protein e | C6B13_21985 | Not Available | Negative | 4349931 - 4351439 | 56042.2 |
| type iv pilus biogenesis protein pilp | C6B13_21990 | Not Available | Negative | 4351524 - 4351976 | 16292.5 |
| pilus assembly protein | C6B13_21995 | Not Available | Negative | 4351966 - 4353261 | 47696.5 |
| piln family type ivb pilus formation outer membrane protein | C6B13_22000 | Not Available | Negative | 4353282 - 4354901 | 57515.6 |
| pilm | C6B13_22005 | Not Available | Negative | 4354932 - 4355369 | 16233.4 |
| pilus assembly protein | C6B13_22010 | Not Available | Negative | 4355374 - 4356441 | 38733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





