Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid transfer atpase traj | C6B13_21910 | Not Available | Negative | 4337992 - 4339140 | 42485.9 |
| conjugal transfer protein | C6B13_21915 | Not Available | Negative | 4339124 - 4339960 | 31696.9 |
| hypothetical protein | C6B13_21920 | Not Available | Negative | 4339957 - 4340409 | 16506.8 |
| conjugal transfer protein traf | C6B13_21925 | Not Available | Negative | 4340768 - 4341970 | 42950.0 |
| conjugal transfer protein trae | C6B13_21930 | Not Available | Negative | 4342060 - 4342881 | 31155.0 |
| hypothetical protein | C6B13_21935 | Not Available | Positive | 4343141 - 4343461 | 12036.6 |
| hypothetical protein | C6B13_21940 | Not Available | Negative | 4343553 - 4343843 | 10802.0 |
| site-specific integrase | C6B13_21945 | Not Available | Negative | 4343885 - 4345054 | 44876.5 |
| shufflon protein c | C6B13_21950 | Not Available | Positive | 4345109 - 4345381 | 10101.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C6B13_21960 | Not Available | Negative | 4345669 - 4347033 | 48965.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





