Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter substrate-binding protein rbsb | C6B13_21125 | Not Available | Positive | 4172263 - 4173153 | 30940.2 |
| ribokinase | C6B13_21130 | Not Available | Positive | 4173279 - 4174208 | 32282.3 |
| transcriptional regulator rbsr | C6B13_21135 | Not Available | Positive | 4174212 - 4175204 | 36600.1 |
| mfs transporter | C6B13_21140 | Not Available | Negative | 4175170 - 4176597 | 51464.9 |
| transcriptional regulator | C6B13_21145 | Not Available | Negative | 4176620 - 4177312 | 26077.5 |
| enhanced serine sensitivity protein sseb | C6B13_21150 | Not Available | Negative | 4177723 - 4178492 | 28400.8 |
| aminopeptidase pepb | C6B13_21155 | Not Available | Negative | 4178635 - 4179918 | 46139.6 |
| fe-s assembly protein iscx | C6B13_21160 | Not Available | Negative | 4179977 - 4180177 | 7731.92 |
| isc system 2fe-2s type ferredoxin | C6B13_21165 | Not Available | Negative | 4180189 - 4180524 | 12359.5 |
| molecular chaperone hsca | C6B13_21170 | Not Available | Negative | 4180526 - 4182376 | 65672.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





