Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | C6B13_20285 | Not Available | Positive | 4009291 - 4009440 | 5594.87 |
| sugar efflux transporter | C6B13_20290 | Not Available | Positive | 4009824 - 4011008 | 43492.1 |
| eama family transporter | C6B13_20295 | Not Available | Positive | 4011119 - 4012042 | 33061.3 |
| lipoprotein nlpa | C6B13_20300 | Not Available | Negative | 4012046 - 4012864 | 29397.3 |
| hypothetical protein | C6B13_20305 | Not Available | Positive | 4013073 - 4013366 | 11049.3 |
| cesd/sycd/lcrh family type iii secretion system chaperone | C6B13_20310 | Not Available | Positive | 4013668 - 4014165 | 19112.8 |
| type iii cell invasion protein sipb | C6B13_20320 | Not Available | Positive | 4014414 - 4016195 | 63906.1 |
| hypothetical protein | C6B13_20325 | Not Available | Positive | 4016208 - 4017359 | 43590.3 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | C6B13_20330 | Not Available | Positive | 4017403 - 4018752 | 50064.6 |
| transcriptional regulator hila | C6B13_20335 | Not Available | Positive | 4018955 - 4020652 | 63939.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





