Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 3-alpha-galactosyltransferase | C6B13_20085 | Not Available | Negative | 3968633 - 3969649 | 38764.9 |
| lipopolysaccharide core heptose(i) kinase rfap | C6B13_20090 | Not Available | Negative | 3969665 - 3970462 | 31121.1 |
| glycosyltransferase family 1 protein | C6B13_20095 | Not Available | Negative | 3970455 - 3971579 | 42584.7 |
| lipopolysaccharide core heptosyltransferase rfaq | C6B13_20100 | Not Available | Negative | 3971576 - 3972634 | 39462.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | C6B13_20105 | Not Available | Positive | 3973047 - 3974324 | 47309.9 |
| phosphopantetheine adenylyltransferase | C6B13_20110 | Not Available | Positive | 3974332 - 3974811 | 17837.7 |
| formamidopyrimidine-dna glycosylase | C6B13_20115 | Not Available | Negative | 3974850 - 3975659 | 30261.8 |
| 50s ribosomal protein l33 | C6B13_20120 | Not Available | Negative | 3975757 - 3975924 | 6371.94 |
| 50s ribosomal protein l28 | C6B13_20125 | Not Available | Negative | 3975945 - 3976181 | 9007.02 |
| jab domain-containing protein | C6B13_20130 | Not Available | Negative | 3976398 - 3977066 | 25259.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





