Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | C6B13_19715 | Not Available | Negative | 3893764 - 3894078 | 12235.4 |
| rhamnulose-1-phosphate aldolase | C6B13_19720 | Not Available | Negative | 3894088 - 3894912 | 30058.2 |
| l-rhamnose isomerase | C6B13_19725 | Not Available | Negative | 3895097 - 3896356 | 47260.0 |
| rhamnulokinase | C6B13_19730 | Not Available | Negative | 3896353 - 3897822 | 54144.3 |
| transcriptional activator rhas | C6B13_19735 | Not Available | Positive | 3898110 - 3898946 | 32332.2 |
| hth-type transcriptional activator rhar | C6B13_19740 | Not Available | Positive | 3898930 - 3899868 | 35610.3 |
| superoxide dismutase | C6B13_19750 | Not Available | Positive | 3901183 - 3901803 | 23107.2 |
| 2-keto-3-deoxygluconate permease | C6B13_19755 | Not Available | Positive | 3901978 - 3902085 | 3754.4 |
| 2-keto-3-deoxygluconate transporter | C6B13_19760 | Not Available | Positive | 3902063 - 3903046 | 33705.4 |
| 6-n-hydroxylaminopurine resistance protein | C6B13_19765 | Not Available | Positive | 3903195 - 3903869 | 25332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





