Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | C6B13_18145 | Not Available | Positive | 3589211 - 3589480 | 10269.4 |
| polyribonucleotide nucleotidyltransferase | C6B13_18150 | Not Available | Positive | 3589727 - 3591862 | 77119.6 |
| lipoprotein nlpi | C6B13_18155 | Not Available | Positive | 3591971 - 3592855 | 33622.5 |
| protein yrbn | C6B13_18160 | Not Available | Positive | 3592962 - 3593042 | 2979.59 |
| dead/deah box family atp-dependent rna helicase | C6B13_18165 | Not Available | Positive | 3593035 - 3594924 | 70550.5 |
| tryptophan permease | C6B13_18170 | Not Available | Positive | 3595078 - 3596322 | 44427.4 |
| llm class flavin-dependent oxidoreductase | C6B13_18175 | Not Available | Negative | 3596441 - 3597448 | 37219.6 |
| u32 family peptidase | C6B13_18180 | Not Available | Negative | 3597529 - 3598407 | 32507.1 |
| protease | C6B13_18185 | Not Available | Negative | 3598416 - 3599411 | 37049.2 |
| scp2 domain-containing protein | C6B13_18190 | Not Available | Positive | 3599620 - 3600144 | 19673.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





