Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase adaptor protein rapz | C6B13_17945 | Not Available | Negative | 3553072 - 3553926 | 32494.2 |
| pts iia-like nitrogen regulatory protein ptsn | C6B13_17950 | Not Available | Negative | 3553972 - 3554463 | 17960.6 |
| ribosome hibernation promoting factor | C6B13_17955 | Not Available | Negative | 3554581 - 3554868 | 10750.9 |
| rna polymerase sigma-54 factor | C6B13_17960 | Not Available | Negative | 3554891 - 3556324 | 53996.8 |
| abc transporter atp-binding protein | C6B13_17965 | Not Available | Negative | 3556372 - 3557097 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | C6B13_17970 | Not Available | Negative | 3557104 - 3557661 | 20128.1 |
| lps export abc transporter periplasmic protein lptc | C6B13_17975 | Not Available | Negative | 3557630 - 3558205 | 21703.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | C6B13_17980 | Not Available | Negative | 3558202 - 3558768 | 20016.3 |
| arabinose 5-phosphate isomerase kdsd | C6B13_17985 | Not Available | Negative | 3558789 - 3559775 | 35198.3 |
| calcium/sodium antiporter | C6B13_17990 | Not Available | Negative | 3559789 - 3560766 | 34745.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





