Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6B13_17785 | Not Available | Positive | 3521955 - 3522227 | 10796.7 |
| duf1471 domain-containing protein | C6B13_17790 | Not Available | Negative | 3522284 - 3522547 | 9196.89 |
| arginine repressor | C6B13_17795 | Not Available | Negative | 3522912 - 3523382 | 16995.5 |
| malate dehydrogenase | C6B13_17800 | Not Available | Positive | 3523817 - 3524755 | 32339.3 |
| outer membrane-stress sensor serine endopeptidase degs | C6B13_17805 | Not Available | Negative | 3524818 - 3525885 | 37583.4 |
| periplasmic ph-dependent serine endoprotease degq | C6B13_17810 | Not Available | Negative | 3525975 - 3527342 | 47207.9 |
| hypothetical protein | C6B13_17815 | Not Available | Negative | 3527496 - 3527894 | 14961.7 |
| cell division protein zape | C6B13_17820 | Not Available | Positive | 3528088 - 3529215 | 43071.1 |
| 50s ribosomal protein l13 | C6B13_17825 | Not Available | Positive | 3529434 - 3529862 | 16019.5 |
| 30s ribosomal protein s9 | C6B13_17830 | Not Available | Positive | 3529878 - 3530270 | 14857.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





