Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | C6B13_17575 | Not Available | Negative | 3478970 - 3479995 | 37034.8 |
| hypothetical protein | C6B13_17580 | Not Available | Negative | 3480024 - 3480200 | 6700.4 |
| hypothetical protein | C6B13_17585 | Not Available | Positive | 3480232 - 3480516 | 10563.2 |
| hypothetical protein | C6B13_17590 | Not Available | Negative | 3480426 - 3480647 | 7452.14 |
| multidrug efflux rnd transporter permease subunit | C6B13_17595 | Not Available | Negative | 3480900 - 3484004 | 111384.0 |
| mexx family efflux pump subunit | C6B13_17600 | Not Available | Negative | 3484016 - 3485173 | 41255.9 |
| acref/envcd operon transcriptional regulator | C6B13_17610 | Not Available | Positive | 3485572 - 3486234 | 25195.7 |
| duf2556 domain-containing protein | C6B13_17615 | Not Available | Negative | 3486237 - 3486416 | 7203.93 |
| fis family transcriptional regulator | C6B13_17625 | Not Available | Negative | 3487470 - 3487766 | 11240.6 |
| trna dihydrouridine synthase dusb | C6B13_17630 | Not Available | Negative | 3487792 - 3488757 | 35868.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





