Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | C6B13_17345 | Not Available | Positive | 3442170 - 3443069 | 32664.8 |
| glucose-1-phosphate thymidylyltransferase rfba | C6B13_17350 | Not Available | Positive | 3443127 - 3444005 | 32482.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | C6B13_17355 | Not Available | Positive | 3444010 - 3444558 | 20833.7 |
| flippase | C6B13_17360 | Not Available | Positive | 3444590 - 3445828 | 45927.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C6B13_17365 | Not Available | Positive | 3445838 - 3446965 | 42138.4 |
| glycosyl transferase family 2 | C6B13_17370 | Not Available | Positive | 3446980 - 3448044 | 40894.1 |
| epsg family protein | C6B13_17375 | Not Available | Positive | 3448096 - 3449100 | 39320.5 |
| glycosyltransferase family 2 protein | C6B13_17380 | Not Available | Positive | 3449102 - 3450061 | 36730.4 |
| glycosyltransferase family 1 protein | C6B13_17385 | Not Available | Positive | 3450071 - 3451135 | 41033.1 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | C6B13_17390 | Not Available | Positive | 3451240 - 3452646 | 51499.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





