Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2300 domain-containing protein | C6B13_00495 | Not Available | Negative | 96756 - 98405 | 61438.2 |
| duf1175 domain-containing protein | C6B13_00505 | Not Available | Negative | 102944 - 103567 | 23752.5 |
| duf2138 domain-containing protein | C6B13_00510 | Not Available | Negative | 103564 - 105252 | 62644.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 105619 - 105734 | Not Available |
| dna topoisomerase (atp-hydrolyzing) subunit a | C6B13_00515 | Not Available | Negative | 105401 - 108028 | 97024.4 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | C6B13_00520 | Not Available | Positive | 108175 - 108897 | 26543.0 |
| aida-i family autotransporter yfal | C6B13_00525 | Not Available | Negative | 109038 - 112796 | 132034.0 |
| ribonucleoside-diphosphate reductase subunit alpha | C6B13_00535 | Not Available | Positive | 113492 - 115777 | 85721.0 |
| ribonucleotide-diphosphate reductase subunit beta | C6B13_00540 | Not Available | Positive | 115923 - 117053 | 43503.6 |
| ferredoxin | C6B13_00545 | Not Available | Positive | 117053 - 117307 | 9293.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





