Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance outer membrane protein mdtq | C6B13_16845 | Not Available | Positive | 3325289 - 3326725 | 52171.9 |
| sdr family oxidoreductase | C6B13_16850 | Not Available | Positive | 3326778 - 3327539 | 26918.4 |
| deda family protein | C6B13_16855 | Not Available | Negative | 3327658 - 3328236 | 21446.9 |
| yip1 family protein | C6B13_16860 | Not Available | Positive | 3328406 - 3328993 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | C6B13_16865 | Not Available | Positive | 3329167 - 3330099 | 33855.3 |
| d-lactate dehydrogenase | C6B13_16870 | Not Available | Negative | 3330138 - 3331853 | 64707.1 |
| beta-glucosidase bglx | C6B13_16875 | Not Available | Positive | 3332049 - 3334346 | 83489.8 |
| abc transporter substrate-binding protein | C6B13_16880 | Not Available | Positive | 3334619 - 3335536 | 32732.1 |
| abc transporter permease | C6B13_16885 | Not Available | Positive | 3335543 - 3336700 | 41160.2 |
| abc transporter atp-binding protein | C6B13_16890 | Not Available | Positive | 3336693 - 3337619 | 34438.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





