Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6B13_16625 | Not Available | Positive | 3287378 - 3288670 | 49716.6 |
| fmn-dependent nadh-azoreductase | C6B13_16630 | Not Available | Negative | 3288724 - 3289329 | 21658.9 |
| atp-dependent rna helicase hrpa | C6B13_16635 | Not Available | Positive | 3289530 - 3293432 | 148983.0 |
| ydcf family protein | C6B13_16640 | Not Available | Positive | 3293705 - 3294505 | 29679.3 |
| aldehyde dehydrogenase | C6B13_16645 | Not Available | Positive | 3294702 - 3296141 | 52299.9 |
| cytochrome b | C6B13_16655 | Not Available | Positive | 3297371 - 3297901 | 20261.7 |
| hypothetical protein | C6B13_16660 | Not Available | Positive | 3298146 - 3298319 | 5764.08 |
| type i toxin-antitoxin system hok family toxin | C6B13_16665 | Not Available | Negative | 3298391 - 3298540 | 5645.21 |
| hamp domain-containing protein | C6B13_16670 | Not Available | Positive | 3298915 - 3300555 | 58807.2 |
| lysr family transcriptional regulator | C6B13_16675 | Not Available | Negative | 3300594 - 3301517 | 33375.5 |
Pathways
861 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





