Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6B13_16525 | Not Available | Positive | 3265525 - 3265698 | 6427.87 |
| atp-dependent rna helicase dbpa | C6B13_16530 | Not Available | Positive | 3265728 - 3267101 | 49314.9 |
| trna 2-thiocytidine(32) synthetase ttca | C6B13_16535 | Not Available | Negative | 3267230 - 3268165 | 35461.8 |
| universal stress protein uspf | C6B13_16540 | Not Available | Negative | 3268341 - 3268775 | 15959.4 |
| porin omps2 | C6B13_16545 | Not Available | Negative | 3268916 - 3270049 | 41180.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C6B13_16550 | Not Available | Negative | 3270410 - 3273934 | 128823.0 |
| duf333 domain-containing protein | C6B13_16555 | Not Available | Positive | 3274208 - 3274474 | 8696.44 |
| heat-shock protein hslj | C6B13_16560 | Not Available | Negative | 3274471 - 3274893 | 15166.5 |
| lactate dehydrogenase | C6B13_16565 | Not Available | Negative | 3275004 - 3275993 | 36536.9 |
| ydbh family protein | C6B13_16570 | Not Available | Positive | 3276201 - 3278840 | 96858.3 |
Pathways
448 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





