Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6B13_16420 | Not Available | Positive | 3243979 - 3245376 | 52597.5 |
| tigr01620 family protein | C6B13_16425 | Not Available | Positive | 3245373 - 3246434 | 39381.4 |
| transcriptional regulator tyrr | C6B13_16430 | Not Available | Positive | 3246582 - 3248123 | 57657.5 |
| 2-cys peroxiredoxin | C6B13_16435 | Not Available | Negative | 3248167 - 3248673 | 17836.3 |
| l-ala-d/l-glu epimerase | C6B13_16440 | Not Available | Positive | 3248792 - 3249757 | 34681.0 |
| murein tripeptide amidase mpaa | C6B13_16445 | Not Available | Negative | 3249732 - 3250460 | 26610.5 |
| peptide abc transporter substrate-binding protein | C6B13_16450 | Not Available | Positive | 3250643 - 3252256 | 59933.3 |
| low conductance mechanosensitive channel ynai | C6B13_16455 | Not Available | Negative | 3252307 - 3253338 | 38742.8 |
| duf2534 domain-containing protein | C6B13_16460 | Not Available | Positive | 3253582 - 3253839 | 9339.82 |
| universal stress protein e | C6B13_16465 | Not Available | Negative | 3253889 - 3254839 | 35708.9 |
Pathways
1022 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





