Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C6B13_16370 | Not Available | Positive | 3233145 - 3234026 | 33227.3 |
| carbohydrate abc transporter permease | C6B13_16375 | Not Available | Positive | 3234013 - 3234855 | 31300.2 |
| alcohol dehydrogenase | C6B13_16380 | Not Available | Positive | 3234886 - 3235938 | 38251.7 |
| hypothetical protein | C6B13_16385 | Not Available | Positive | 3235956 - 3236744 | 29819.5 |
| gfo/idh/moca family oxidoreductase | C6B13_16390 | Not Available | Positive | 3236754 - 3237809 | 38674.3 |
| glycoside hydrolase family 65 protein | C6B13_16395 | Not Available | Positive | 3237806 - 3240073 | 84986.4 |
| beta-phosphoglucomutase | C6B13_16400 | Not Available | Positive | 3240070 - 3240729 | 23700.5 |
| abc transporter atp-binding protein | C6B13_16405 | Not Available | Positive | 3240743 - 3241825 | 40133.0 |
| duf481 domain-containing protein | C6B13_16410 | Not Available | Positive | 3241870 - 3242775 | 34860.9 |
| laci family transcriptional regulator | C6B13_16415 | Not Available | Negative | 3242826 - 3243824 | 36154.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





