Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease sapc | C6B13_16270 | Not Available | Negative | 3213675 - 3214565 | 31550.0 |
| antimicrobial peptide abc transporter permease sapb | C6B13_16275 | Not Available | Negative | 3214552 - 3215517 | 36026.1 |
| peptide abc transporter substrate-binding protein sapa | C6B13_16280 | Not Available | Negative | 3215514 - 3217157 | 61453.0 |
| hypothetical protein | C6B13_16285 | Not Available | Negative | 3217200 - 3217400 | 7171.66 |
| duf2543 domain-containing protein | C6B13_16290 | Not Available | Negative | 3217470 - 3217715 | 9307.77 |
| apc family permease | C6B13_16295 | Not Available | Negative | 3217849 - 3219234 | 50832.9 |
| gamma-glutamylputrescine synthetase puua | C6B13_16300 | Not Available | Negative | 3219537 - 3220955 | 53180.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | C6B13_16305 | Not Available | Positive | 3221167 - 3221931 | 27999.8 |
| transcriptional regulator | C6B13_16310 | Not Available | Positive | 3221958 - 3222515 | 20092.8 |
| aldehyde dehydrogenase puuc | C6B13_16315 | Not Available | Positive | 3222665 - 3224152 | 53522.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





