Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00645 family protein | C6B13_15940 | Not Available | Positive | 3154189 - 3154683 | 18642.3 |
| l-glyceraldehyde 3-phosphate reductase | C6B13_15945 | Not Available | Negative | 3154741 - 3155763 | 38254.8 |
| dienelactone hydrolase family protein | C6B13_15950 | Not Available | Positive | 3155881 - 3156807 | 34127.7 |
| duf2623 domain-containing protein | C6B13_15955 | Not Available | Positive | 3156926 - 3157213 | 10946.1 |
| hypothetical protein | C6B13_15960 | Not Available | Positive | 3157210 - 3157395 | 6965.43 |
| hydrogenase-2 small chain | C6B13_15965 | Not Available | Positive | 3157402 - 3158520 | 39654.3 |
| hydrogenase-2 operon protein hyba | C6B13_15970 | Not Available | Positive | 3158523 - 3159509 | 36005.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | C6B13_15975 | Not Available | Positive | 3159499 - 3160677 | 43604.6 |
| hydrogenase-2 large chain | C6B13_15980 | Not Available | Positive | 3160674 - 3162377 | 62494.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | C6B13_15985 | Not Available | Positive | 3162377 - 3162871 | 17724.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





