Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | C6B13_15485 | Not Available | Negative | 3064051 - 3065484 | 52175.7 |
| beta-galactosidase subunit beta | C6B13_15490 | Not Available | Negative | 3065547 - 3065996 | 17517.6 |
| beta-galactosidase subunit alpha | C6B13_15495 | Not Available | Negative | 3065993 - 3069085 | 117743.0 |
| transcriptional regulator ebgr | C6B13_15500 | Not Available | Negative | 3069269 - 3070252 | 36305.7 |
| pp_03059 | C6B13_15505 | Not Available | Positive | 3070471 - 3070803 | Not Available |
| putrescine aminotransferase | C6B13_15510 | Not Available | Negative | 3070845 - 3072224 | 49604.1 |
| hypothetical protein | C6B13_15515 | Not Available | Negative | 3072160 - 3072366 | 7651.02 |
| pas domain s-box protein | C6B13_15520 | Not Available | Positive | 3072642 - 3074162 | 55088.0 |
| padr family transcriptional regulator | C6B13_15525 | Not Available | Negative | 3074258 - 3074881 | 23432.7 |
| siderophore-interacting protein | C6B13_15530 | Not Available | Positive | 3075169 - 3075933 | 28921.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





