Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C6B13_15430 | Not Available | Negative | 3052373 - 3053338 | 36055.2 |
| gfo/idh/moca family oxidoreductase | C6B13_15435 | Not Available | Negative | 3053621 - 3054607 | 36349.4 |
| vancomycin high temperature exclusion protein | C6B13_15440 | Not Available | Negative | 3054686 - 3055378 | 25540.3 |
| m48 family peptidase | C6B13_15445 | Not Available | Negative | 3055455 - 3055958 | 19456.6 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | C6B13_15450 | Not Available | Positive | 3056043 - 3057179 | 42328.9 |
| addiction module toxin rele | C6B13_15455 | Not Available | Positive | 3057283 - 3057522 | 9098.2 |
| type ii toxin-antitoxin system higa family antitoxin | C6B13_15465 | Not Available | Positive | 3057774 - 3058190 | 15024.3 |
| nadph-dependent 2,4-dienoyl-coa reductase | C6B13_15470 | Not Available | Negative | 3058235 - 3060253 | 72560.4 |
| alpha-glucosidase | C6B13_15475 | Not Available | Negative | 3060479 - 3062830 | 88365.8 |
| protein ygjj | C6B13_15480 | Not Available | Negative | 3062847 - 3063917 | 40165.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





