Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | C6B13_15380 | Not Available | Negative | 3039216 - 3039992 | 29837.3 |
| fimbrial protein | C6B13_15385 | Not Available | Positive | 3040377 - 3041000 | 23028.5 |
| fimbrial protein | C6B13_15390 | Not Available | Positive | 3041030 - 3041530 | 17686.5 |
| fimbrial protein | C6B13_15395 | Not Available | Positive | 3041621 - 3044305 | 98425.7 |
| pilus assembly protein cbld | C6B13_15400 | Not Available | Positive | 3044302 - 3045396 | 40364.9 |
| mfs transporter | C6B13_15405 | Not Available | Negative | 3045472 - 3046770 | 46909.0 |
| uronate isomerase | C6B13_15410 | Not Available | Positive | 3047253 - 3048665 | 53990.1 |
| altronate dehydratase | C6B13_15415 | Not Available | Positive | 3048680 - 3050167 | 54068.2 |
| ygjv family protein | C6B13_15420 | Not Available | Positive | 3050250 - 3050801 | 20566.7 |
| serine/threonine transporter sstt | C6B13_15425 | Not Available | Negative | 3050805 - 3052049 | 43494.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





