Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | C6B13_15270 | Not Available | Positive | 3021639 - 3022970 | 48895.8 |
| propionate kinase | C6B13_15275 | Not Available | Positive | 3022996 - 3024204 | 43398.7 |
| pfl-like enzyme tdce | C6B13_15280 | Not Available | Positive | 3024238 - 3026532 | 85954.4 |
| reactive intermediate/imine deaminase | C6B13_15285 | Not Available | Positive | 3026546 - 3026935 | 14008.0 |
| l-serine ammonia-lyase | C6B13_15290 | Not Available | Positive | 3027007 - 3028371 | 48476.6 |
| transporter | C6B13_15300 | Not Available | Positive | 3028646 - 3029977 | 48317.6 |
| serine dehydratase subunit alpha family protein | C6B13_15305 | Not Available | Positive | 3030005 - 3031315 | 45320.8 |
| hypothetical protein | C6B13_15310 | Not Available | Negative | 3031448 - 3031612 | 5951.07 |
| pirin family protein | C6B13_15315 | Not Available | Negative | 3031635 - 3032336 | 25931.0 |
| lysr family transcriptional regulator | C6B13_15320 | Not Available | Positive | 3032441 - 3033337 | 33259.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





