Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | C6B13_15050 | Not Available | Negative | 2980062 - 2981075 | 38087.9 |
| duf2867 domain-containing protein | C6B13_15055 | Not Available | Negative | 2981174 - 2982604 | 53697.1 |
| low-specificity l-threonine aldolase | C6B13_15060 | Not Available | Negative | 2982615 - 2983616 | 36438.8 |
| ubiquinone-dependent pyruvate dehydrogenase | C6B13_15065 | Not Available | Negative | 2983653 - 2985371 | 62061.0 |
| hybrid-cluster nad(p)-dependent oxidoreductase | C6B13_15070 | Not Available | Negative | 2985504 - 2986472 | 35741.8 |
| hydroxylamine reductase | C6B13_15075 | Not Available | Negative | 2986484 - 2988136 | 60120.3 |
| hypothetical protein | C6B13_15080 | Not Available | Positive | 2988135 - 2988314 | 6862.52 |
| duf340 domain-containing protein | C6B13_15085 | Not Available | Negative | 2988279 - 2989178 | 32354.2 |
| aquaporin | C6B13_15095 | Not Available | Negative | 2989636 - 2990331 | 23703.2 |
| atp-dependent endonuclease | C6B13_15100 | Not Available | Positive | 2990757 - 2992415 | 63560.9 |
Pathways
868 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





