Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-insensitive nadph nitroreductase | C6B13_14945 | Not Available | Positive | 2963239 - 2963961 | 26877.2 |
| 30s ribosomal protein s6--l-glutamate ligase | C6B13_14950 | Not Available | Positive | 2964022 - 2964924 | 32438.5 |
| ybjn domain-containing protein | C6B13_14955 | Not Available | Positive | 2965012 - 2965488 | 17667.1 |
| putrescine/spermidine abc transporter substrate-binding protein | C6B13_14960 | Not Available | Positive | 2965694 - 2965855 | 6387.65 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C6B13_14965 | Not Available | Positive | 2965839 - 2966951 | 40885.7 |
| polyamine abc transporter atp-binding protein | C6B13_14970 | Not Available | Positive | 2967046 - 2968179 | 41981.4 |
| putrescine abc transporter permease | C6B13_14975 | Not Available | Positive | 2968189 - 2969142 | 35457.6 |
| spermidine/putrescine abc transporter permease | C6B13_14980 | Not Available | Positive | 2969139 - 2969984 | 30542.4 |
| duf2593 domain-containing protein | C6B13_14985 | Not Available | Positive | 2970044 - 2970532 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | C6B13_14990 | Not Available | Positive | 2970573 - 2971700 | 41959.1 |
Pathways
1108 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





