Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | C6B13_14415 | Not Available | Positive | 2862743 - 2864104 | 49976.4 |
| duf1768 domain-containing protein | C6B13_14420 | Not Available | Negative | 2864338 - 2864820 | 18617.2 |
| atp-dependent dna helicase ding | C6B13_14430 | Not Available | Positive | 2864940 - 2867090 | 81459.9 |
| dna-binding protein ybib | C6B13_14435 | Not Available | Positive | 2867118 - 2868080 | 35108.7 |
| dehydrogenase | C6B13_14440 | Not Available | Positive | 2868221 - 2869306 | 38913.3 |
| duf1471 domain-containing protein | C6B13_14445 | Not Available | Negative | 2869446 - 2869706 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | C6B13_14450 | Not Available | Negative | 2869971 - 2870237 | 9785.37 |
| fe2+-dependent dioxygenase | C6B13_14455 | Not Available | Negative | 2870311 - 2870988 | 25492.2 |
| catecholate siderophore receptor fiu | C6B13_14460 | Not Available | Negative | 2871030 - 2873312 | 81902.4 |
| duf1471 domain-containing protein | C6B13_14465 | Not Available | Negative | 2873577 - 2873981 | 14602.7 |
Pathways
574 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





